Transcript: ENSDART00000158276.2 lamc2-202

Description

laminin, gamma 2 [Source:ZFIN;Acc:ZDB-GENE-110222-3]

Location

Chromosome 2: 36,015,049-36,021,608 forward strand.

About this transcript

This transcript has 7 exons, is annotated with 2 domains and features, is associated with 429 variant alleles and maps to 106 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000068288.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000098706.6	lamc2-201	2211	736aa	ENSDARP00000089477.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000158276.2	lamc2-202	1406	347aa	ENSDARP00000136055.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000170845.2	lamc2-205	1287	429aa	ENSDARP00000141348.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000161837.2	lamc2-203	756	252aa	ENSDARP00000134080.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000162960.2	lamc2-204	608	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 1,406 bps, Translation length: 347 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000158276.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000158276.2 lamc2-202

Summary

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Transcript: ENSDART00000158276.2 lamc2-202

Summary

About Us

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