Transcript: ENSDART00000158248.2 brd3b-201

Description

bromodomain containing 3b [Source:ZFIN;Acc:ZDB-GENE-030131-5316]

Gene Synonyms

fa28f05, wu:fa28f05, wu:fc56a11, wu:fj66d12, zgc:77289

Location

About this transcript

This transcript has 5 exons, is annotated with 22 domains and features, is associated with 631 variant alleles and maps to 147 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000168030.2	brd3b-202	4755	664aa	ENSDARP00000129878.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A5PN48	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000172321.2	brd3b-203	2168	625aa	ENSDARP00000141933.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0J9YJN1	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000158248.2	brd3b-201	911	304aa	ENSDARP00000136696.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IRB1	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 911 bps, Translation length: 304 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENSDART00000158248.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.