Transcript: ENSDART00000158220.3 ifi35-204

Description

interferon-induced protein 35 [Source:ZFIN;Acc:ZDB-GENE-100311-2]

Location

Chromosome 3: 29,942,338-29,948,404 forward strand.

About this transcript

This transcript has 9 exons, is annotated with 11 domains and features, is associated with 201 variant alleles and maps to 131 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000075643.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000158220.3	ifi35-204	1155	384aa	ENSDARP00000133347.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000113889.5	ifi35-201	1745	371aa	ENSDARP00000101080.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000151072.2	ifi35-202	714	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
ENSDART00000151111.2	ifi35-203	665	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 1,155 bps, Translation length: 384 residues

Version

ENSDART00000158220.3

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSDART00000158220.3 ifi35-204

Summary

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Transcript: ENSDART00000158220.3 ifi35-204

Summary

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