Transcript: ENSDART00000158097.2 tlr1-201

Description

toll-like receptor 1 [Source:ZFIN;Acc:ZDB-GENE-040220-1]

Gene Synonyms

TIR1.2, tlr6

Location

About this transcript

This transcript has 1 exon, is annotated with 16 domains and features, is associated with 176 variant alleles and maps to 182 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000168611.2	tlr1-202	2517	795aa	ENSDARP00000139386.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IW15	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000158097.2	tlr1-201	1702	288aa	ENSDARP00000133513.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IGC9	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 1, Coding exons: 1, Transcript length: 1,702 bps, Translation length: 288 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000158097.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported partial [Definitions]