Transcript: ENSDART00000158077.3 arr3b-201

Description

arrestin 3b, retinal (X-arrestin) [Source:ZFIN;Acc:ZDB-GENE-030616-74]

Gene Synonyms

arr3, si:bz46j2.6, zgc:73331

Location

Chromosome 14: 32,838,110-32,849,528 forward strand.

About this transcript

This transcript has 16 exons, is annotated with 15 domains and features, is associated with 108 variant alleles and maps to 348 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000098475.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000158888.3	arr3b-202	3584	364aa	ENSDARP00000135786.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IMS8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000158077.3	arr3b-201	1755	362aa	ENSDARP00000141732.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6PBM9	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000168975.3	arr3b-203	728	204aa	ENSDARP00000130681.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4ID52	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000172785.2	arr3b-204	1029	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 16, Coding exons: 15, Transcript length: 1,755 bps, Translation length: 362 residues

Version

ENSDART00000158077.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

dotter confirmed [Definitions]

Transcript: ENSDART00000158077.3 arr3b-201

Summary

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Transcript: ENSDART00000158077.3 arr3b-201

Summary

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