Transcript: ENSDART00000158068.2 ilf3b-201

Description

interleukin enhancer binding factor 3b [Source:ZFIN;Acc:ZDB-GENE-030131-587]

Gene Synonyms

ilf3, wu:fb37d07, wu:fb94b02, zgc:77030

Location

Chromosome 3: 13,842,581-13,855,721 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 7 domains and features, is associated with 426 variant alleles and maps to 84 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000105177.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000162317.2	ilf3b-202	3305	833aa	ENSDARP00000140809.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000184342.1	ilf3b-207	5157	833aa	ENSDARP00000148432.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000162451.2	ilf3b-203	1360	214aa	ENSDARP00000138361.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000168315.2	ilf3b-206	1124	308aa	ENSDARP00000132586.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000158068.2	ilf3b-201	780	218aa	ENSDARP00000130355.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000164872.2	ilf3b-204	729	243aa	ENSDARP00000138304.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000165808.2	ilf3b-205	801	191aa	ENSDARP00000129964.1	Nonsense mediated decay	-

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 780 bps, Translation length: 218 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000158068.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

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Transcript: ENSDART00000158068.2 ilf3b-201

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Transcript: ENSDART00000158068.2 ilf3b-201

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