Transcript: ENSDART00000157659.3 camta1b-202

Description

calmodulin binding transcription activator 1b [Source:ZFIN;Acc:ZDB-GENE-080229-1]

Gene Synonyms

camta1, im:7144854

Location

About this transcript

This transcript has 18 exons, is annotated with 42 domains and features, is associated with 3859 variant alleles and maps to 173 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000046663.8	camta1b-201	9538	1626aa	ENSDARP00000046662.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F2K8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000157659.3	camta1b-202	9507	1626aa	ENSDARP00000129879.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0H2UKG9	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 18, Coding exons: 18, Transcript length: 9,507 bps, Translation length: 1,626 residues

Version

ENSDART00000157659.3

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.