Transcript: ENSDART00000157612.2 myt1b-201

Description

myelin transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-090313-67]

Gene Synonyms

fc20e12, si:ch211-194p15.1, wu:fc20e12

Location

Chromosome 23: 7,795,422-7,826,849 reverse strand.

About this transcript

This transcript has 5 exons, is annotated with 8 domains and features, is associated with 9 variant alleles and maps to 20 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000102879.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000165427.2	myt1b-203	3435	1144aa	ENSDARP00000136943.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IRU2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000190946.1	myt1b-205	3351	1116aa	ENSDARP00000149518.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8Q8T0	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000181611.1	myt1b-204	1716	571aa	ENSDARP00000147888.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8Q4X0	-
ENSDART00000157612.2	myt1b-201	330	91aa	ENSDARP00000136165.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IKX0	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000164117.2	myt1b-202	465	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 330 bps, Translation length: 91 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000157612.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000157612.2 myt1b-201

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENSDART00000157612.2 myt1b-201

Summary

About Us

Get help

Our sister sites

Follow us