Transcript: ENSDART00000157602.2 C7H7H19orf12-202

Description

zgc:101715 [Source:ZFIN;Acc:ZDB-GENE-040912-59]

Location

About this transcript

This transcript has 2 exons, is annotated with 5 domains and features, is associated with 12 variant alleles and maps to 182 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000166983.2	C7H7H19orf12-201	1113	141aa	ENSDARP00000130573.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q66ID9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000157602.2	C7H7H19orf12-202	942	141aa	ENSDARP00000142858.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q66ID9	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000171291.2	C7H7H19orf12-203	775	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 942 bps, Translation length: 141 residues

Version

ENSDART00000157602.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.