Transcript: ENSDART00000157547.2 ssrp1a-202

Description

structure specific recognition protein 1a [Source:ZFIN;Acc:ZDB-GENE-031118-9]

Gene Synonyms

ssrp1, wu:fa11b03, wu:fd10f06

Location

About this transcript

This transcript has 4 exons, is annotated with 3 domains and features, is associated with 553 variant alleles and maps to 10 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000137795.3	ssrp1a-201	2593	705aa	ENSDARP00000114529.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QEB4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000157547.2	ssrp1a-202	561	75aa	ENSDARP00000140189.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 4, Coding exons: 2, Transcript length: 561 bps, Translation length: 75 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000157547.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.