Transcript: ENSDART00000157516.2 pcdh1gb2-201

Description

protocadherin 1 gamma b 2 [Source:ZFIN;Acc:ZDB-GENE-041118-19]

Gene Synonyms

DrPcdh1g4, pcdh1g5, pcdh1gb2-A, pcdh1gb2-sCP1, pcdh1gb2-sCP2, pcdh1gb21-sCP1-2

Location

About this transcript

This transcript has 4 exons, is annotated with 66 domains and features, is associated with 488 variant alleles and maps to 119 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000157516.2	pcdh1gb2-201	2856	951aa	ENSDARP00000130093.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8N1YYW5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000171499.2	pcdh1gb2-202	2496	832aa	ENSDARP00000135762.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 2,856 bps, Translation length: 951 residues

Version

ENSDART00000157516.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.