Transcript: ENSDART00000157510.2 relt-201

Description

RELT TNF receptor [Source:ZFIN;Acc:ZDB-GENE-040426-2361]

Gene Synonyms

zgc:77246

Location

About this transcript

This transcript has 11 exons, is annotated with 19 domains and features, is associated with 2607 variant alleles and maps to 149 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000157510.2	relt-201	1909	401aa	ENSDARP00000132358.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IG80	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000185754.1	relt-203	4827	401aa	ENSDARP00000156166.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IG80	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000168106.2	relt-202	441	123aa	ENSDARP00000133148.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IIM1	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 11, Coding exons: 10, Transcript length: 1,909 bps, Translation length: 401 residues

Version

ENSDART00000157510.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.