Transcript: ENSDART00000157378.2 hdac5-202

Description

histone deacetylase 5 [Source:HGNC Symbol;Acc:HGNC:14068]

Location

About this transcript

This transcript has 24 exons, is annotated with 38 domains and features, is associated with 637 variant alleles and maps to 120 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000111435.4	hdac5-201	3387	1128aa	ENSDARP00000100072.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7FH14	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000157378.2	hdac5-202	3583	1076aa	ENSDARP00000128586.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 24, Coding exons: 24, Transcript length: 3,583 bps, Translation length: 1,076 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000157378.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.