Transcript: ENSDART00000157364.3 pbx2-204

Description

pre-B-cell leukemia homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-000405-5]

Gene Synonyms

PBX2, pbxy, wu:fb73g03

Location

Chromosome 16: 48,626,780-48,643,172 forward strand.

About this transcript

This transcript has 5 exons, is annotated with 14 domains and features, is associated with 8 variant alleles and maps to 111 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000019717.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000004751.7	pbx2-201	3678	403aa	ENSDARP00000018156.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9I9B4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000130045.3	pbx2-202	3326	403aa	ENSDARP00000105703.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9I9B4	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000157364.3	pbx2-204	3006	215aa	ENSDARP00000127644.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X1WBQ2	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000154273.2	pbx2-203	671	101aa	ENSDARP00000129676.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X1WHG4	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 3,006 bps, Translation length: 215 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000157364.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000157364.3 pbx2-204

Summary

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Transcript: ENSDART00000157364.3 pbx2-204

Summary

About Us

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