Transcript: ENSDART00000157113.3 si:ch211-157b11.12-203

Description

si:ch211-157b11.12 [Source:ZFIN;Acc:ZDB-GENE-041111-80]

Location

About this transcript

This transcript has 8 exons, is annotated with 8 domains and features, is associated with 267 variant alleles and maps to 181 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000153702.3	si:ch211-157b11.12-201	2190	190aa	ENSDARP00000128695.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M1P8K8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000157113.3	si:ch211-157b11.12-203	2093	188aa	ENSDARP00000127999.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000154810.2	si:ch211-157b11.12-202	1638	171aa	ENSDARP00000127577.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Summary

Statistics

Exons: 8, Coding exons: 8, Transcript length: 2,093 bps, Translation length: 188 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000157113.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.