Transcript: ENSDART00000157076.3 prdm11-202

Description

PR domain containing 11 [Source:ZFIN;Acc:ZDB-GENE-061221-1]

Location

About this transcript

This transcript has 8 exons, is annotated with 12 domains and features, is associated with 502 variant alleles and maps to 82 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000157076.3	prdm11-202	7715	1115aa	ENSDARP00000127476.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R557	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000128099.3	prdm11-201	7216	1115aa	ENSDARP00000107381.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R557	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 8, Coding exons: 7, Transcript length: 7,715 bps, Translation length: 1,115 residues

Version

ENSDART00000157076.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.