Transcript: ENSDART00000156987.3 TSPAN1-201

Description

tetraspanin 1 [Source:ZFIN;Acc:ZDB-GENE-070502-5]

Location

About this transcript

This transcript has 8 exons, is annotated with 25 domains and features, is associated with 701 variant alleles and maps to 135 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000156987.3	TSPAN1-201	1935	242aa	ENSDARP00000128793.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M6Z7L3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000073757.5	TSPAN1-202	729	242aa	ENSDARP00000068247.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M6Z7L3	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 8, Coding exons: 7, Transcript length: 1,935 bps, Translation length: 242 residues

Version

ENSDART00000156987.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.