Transcript: ENSDART00000156883.2 mmp28-202

Description

matrix metallopeptidase 28 [Source:ZFIN;Acc:ZDB-GENE-100226-1]

Gene Synonyms

si:ch1073-408o3.1

Location

About this transcript

This transcript has 5 exons, is annotated with 21 domains and features, is associated with 8 variant alleles and maps to 76 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000180230.1	mmp28-203	2228	501aa	ENSDARP00000153136.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8RUJ1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000082026.6	mmp28-201	1844	373aa	ENSDARP00000076463.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000156883.2	mmp28-202	1149	269aa	ENSDARP00000127669.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 1,149 bps, Translation length: 269 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000156883.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.