Transcript: ENSDART00000156796.2 sh3glb2a-205

Description

SH3-domain GRB2-like endophilin B2a [Source:ZFIN;Acc:ZDB-GENE-061201-8]

Gene Synonyms

sh3glb2, zgc:111880, zgc:158183

Location

Chromosome 8: 2,773,776-2,781,739 forward strand.

About this transcript

This transcript has 5 exons, is annotated with 9 domains and features, is associated with 15 variant alleles and maps to 55 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000008983.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000051403.8	sh3glb2a-201	1371	381aa	ENSDARP00000051402.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1RDJ4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000160551.2	sh3glb2a-206	1386	353aa	ENSDARP00000132194.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IG19	-
ENSDART00000156796.2	sh3glb2a-205	871	124aa	ENSDARP00000127587.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X1WBJ6	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000154529.3	sh3glb2a-202	850	197aa	ENSDARP00000128686.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X1WEN5	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000155092.3	sh3glb2a-203	819	225aa	ENSDARP00000128723.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X1WES2	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000155275.2	sh3glb2a-204	540	86aa	ENSDARP00000128259.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X1WDG0	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 871 bps, Translation length: 124 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000156796.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000156796.2 sh3glb2a-205

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Transcript: ENSDART00000156796.2 sh3glb2a-205

Summary

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