Transcript: ENSDART00000156697.3 col4a3-202

Description

collagen, type IV, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-070802-4]

Location

About this transcript

This transcript has 52 exons, is annotated with 75 domains and features, is associated with 1027 variant alleles and maps to 257 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000156697.3	col4a3-202	9477	1684aa	ENSDARP00000128055.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000049849.8	col4a3-201	2763	920aa	ENSDARP00000049848.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000184099.1	col4a3-203	735	173aa	ENSDARP00000155883.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-

Summary

Statistics

Exons: 52, Coding exons: 52, Transcript length: 9,477 bps, Translation length: 1,684 residues

Version

ENSDART00000156697.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported only [Definitions]