Transcript: ENSDART00000156647.2 glg1a-204

Description

golgi glycoprotein 1 [Source:HGNC Symbol;Acc:HGNC:4316]

Location

About this transcript

This transcript has 9 exons, is annotated with 12 domains and features, is associated with 182 variant alleles and maps to 153 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000087247.6	glg1a-201	4123	1151aa	ENSDARP00000081681.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AB32TFX5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000154045.3	glg1a-202	3968	1130aa	ENSDARP00000129848.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000156647.2	glg1a-204	1038	346aa	ENSDARP00000129523.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000155137.2	glg1a-203	896	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 1,038 bps, Translation length: 346 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENSDART00000156647.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.