Transcript: ENSDART00000156632.2 si:ch211-281l24.3-203

Description

si:ch211-281l24.3 [Source:ZFIN;Acc:ZDB-GENE-131121-575]

Location

Chromosome 15: 40,137,564-40,175,894 reverse strand.

About this transcript

This transcript has 35 exons, is annotated with 37 domains and features, is associated with 225 variant alleles and maps to 368 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000068637.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000156632.2	si:ch211-281l24.3-203	9307	2813aa	ENSDARP00000127934.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7FBQ2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000192991.1	si:ch211-281l24.3-206	5493	679aa	ENSDARP00000145794.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000184014.1	si:ch211-281l24.3-204	2260	679aa	ENSDARP00000156322.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000187958.1	si:ch211-281l24.3-205	2124	701aa	ENSDARP00000146911.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000155018.2	si:ch211-281l24.3-202	930	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000154471.2	si:ch211-281l24.3-201	334	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 35, Coding exons: 34, Transcript length: 9,307 bps, Translation length: 2,813 residues

Version

ENSDART00000156632.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported only [Definitions]

Transcript: ENSDART00000156632.2 si:ch211-281l24.3-203

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENSDART00000156632.2 si:ch211-281l24.3-203

Summary

About Us

Get help

Our sister sites

Follow us