Transcript: ENSDART00000156598.2 masp1-204

Description

MBL associated serine protease 1 [Source:ZFIN;Acc:ZDB-GENE-110421-4]

Gene Synonyms

si:dkeyp-75c7.1

Location

Chromosome 15: 36,188,171-36,213,811 forward strand.

About this transcript

This transcript has 8 exons, is annotated with 28 domains and features, is associated with 399 variant alleles and maps to 88 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000068726.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000154432.3	masp1-202	2468	740aa	ENSDARP00000129578.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X1WH68	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000181536.1	masp1-206	3086	384aa	ENSDARP00000152325.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8QH04	-
ENSDART00000099501.5	masp1-201	2451	766aa	ENSDARP00000090275.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000156598.2	masp1-204	1415	383aa	ENSDARP00000127666.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000156265.2	masp1-203	692	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000157105.2	masp1-205	686	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 8, Coding exons: 8, Transcript length: 1,415 bps, Translation length: 383 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000156598.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported only [Definitions]

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Transcript: ENSDART00000156598.2 masp1-204

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Transcript: ENSDART00000156598.2 masp1-204

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