Transcript: ENSDART00000156580.3 hspa12a-203

Description

heat shock protein 12A [Source:ZFIN;Acc:ZDB-GENE-031001-1]

Gene Synonyms

zgc:153612

Location

Chromosome 17: 21,220,934-21,249,651 reverse strand.

About this transcript

This transcript has 7 exons, is annotated with 4 domains and features, is associated with 868 variant alleles and maps to 147 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000070603.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000123198.4	hspa12a-201	2614	671aa	ENSDARP00000106960.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q8K1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000181356.1	hspa12a-206	2294	655aa	ENSDARP00000149134.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8RN86	-
ENSDART00000156580.3	hspa12a-203	1826	493aa	ENSDARP00000129021.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000157518.2	hspa12a-204	1569	411aa	ENSDARP00000137065.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000155221.3	hspa12a-202	1024	249aa	ENSDARP00000127681.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000166524.2	hspa12a-205	313	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 1,826 bps, Translation length: 493 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000156580.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

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Transcript: ENSDART00000156580.3 hspa12a-203

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Transcript: ENSDART00000156580.3 hspa12a-203

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