Transcript: ENSDART00000156551.2 si:dkey-16p21.8-203

Description

si:dkey-16p21.8 [Source:ZFIN;Acc:ZDB-GENE-131121-428]

Location

Chromosome 3: 32,325,145-32,337,695 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 5 domains and features, is associated with 527 variant alleles and maps to 96 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000096849.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000156918.3	si:dkey-16p21.8-204	603	55aa	ENSDARP00000129831.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X1WCS1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000156551.2	si:dkey-16p21.8-203	577	55aa	ENSDARP00000128018.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X1WCS1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000154239.2	si:dkey-16p21.8-201	504	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000155757.3	si:dkey-16p21.8-202	553	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 4, Coding exons: 2, Transcript length: 577 bps, Translation length: 55 residues

Version

ENSDART00000156551.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000156551.2 si:dkey-16p21.8-203

Summary

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Transcript: ENSDART00000156551.2 si:dkey-16p21.8-203

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