Transcript: ENSDART00000156535.2 ntng1b-201

Description

netrin g1b [Source:ZFIN;Acc:ZDB-GENE-070912-250]

Gene Synonyms

si:ch211-255p13.1

Location

About this transcript

This transcript has 4 exons, is annotated with 19 domains and features, is associated with 1869 variant alleles and maps to 54 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000176628.2	ntng1b-202	4844	471aa	ENSDARP00000144416.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286YB52	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000190795.1	ntng1b-203	4427	471aa	ENSDARP00000148340.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286YB52	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000156535.2	ntng1b-201	1666	364aa	ENSDARP00000128265.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 1,666 bps, Translation length: 364 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000156535.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.