Transcript: ENSDART00000156421.3 myo9ab-203

Description

myosin IXAb [Source:ZFIN;Acc:ZDB-GENE-080424-6]

Location

Chromosome 25: 485,353-518,656 reverse strand.

About this transcript

This transcript has 25 exons, is annotated with 57 domains and features, is associated with 779 variant alleles and maps to 99 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000073843.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000028997.8	myo9ab-201	6861	2286aa	ENSDARP00000032580.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F3F0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000156421.3	myo9ab-203	7584	1477aa	ENSDARP00000128502.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000153559.2	myo9ab-202	497	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 25, Coding exons: 25, Transcript length: 7,584 bps, Translation length: 1,477 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000156421.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000156421.3 myo9ab-203

Summary

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Transcript: ENSDART00000156421.3 myo9ab-203

Summary

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