Transcript: ENSDART00000156228.3 atf7ip2-202

Description

activating transcription factor 7 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-131121-384]

Location

Chromosome 3: 27,058,913-27,066,451 reverse strand.

About this transcript

This transcript has 12 exons, is annotated with 8 domains and features, is associated with 8 variant alleles and maps to 75 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000089698.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000156311.3	atf7ip2-203	1451	369aa	ENSDARP00000129269.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7EZF6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000185660.1	atf7ip2-207	1112	369aa	ENSDARP00000153298.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7EZF6	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000156228.3	atf7ip2-202	920	278aa	ENSDARP00000128754.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000156556.2	atf7ip2-204	774	218aa	ENSDARP00000127702.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000157126.3	atf7ip2-206	501	148aa	ENSDARP00000129475.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000156778.2	atf7ip2-205	305	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000155760.2	atf7ip2-201	1509	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 12, Coding exons: 11, Transcript length: 920 bps, Translation length: 278 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000156228.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000156228.3 atf7ip2-202

Summary

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Transcript: ENSDART00000156228.3 atf7ip2-202

Summary

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