Transcript: ENSDART00000156225.2 stx1a-201

Description

syntaxin 1A (brain) [Source:ZFIN;Acc:ZDB-GENE-100802-1]

Location

About this transcript

This transcript has 10 exons, is annotated with 17 domains and features, is associated with 10 variant alleles and maps to 95 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000156225.2	stx1a-201	867	289aa	ENSDARP00000127800.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X1WC57	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000182311.1	stx1a-202	840	279aa	ENSDARP00000154360.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8QH11	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 867 bps, Translation length: 289 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000156225.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.