Transcript: ENSDART00000156218.2 mdga2a-202

Description

MAM domain containing glycosylphosphatidylinositol anchor 2a [Source:ZFIN;Acc:ZDB-GENE-030616-360]

Gene Synonyms

mamdc1, si:dz209d10.1

Location

About this transcript

This transcript has 6 exons, is annotated with 10 domains and features, is associated with 364 variant alleles and maps to 38 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000033943.8	mdga2a-201	4138	957aa	ENSDARP00000028542.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1RDD1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000158042.3	mdga2a-203	2838	945aa	ENSDARP00000133653.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IIK9	-
ENSDART00000156218.2	mdga2a-202	585	195aa	ENSDARP00000128977.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X1WFH3	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 585 bps, Translation length: 195 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENSDART00000156218.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.