Transcript: ENSDART00000156215.3 trappc12-202

Description

trafficking protein particle complex subunit 12 [Source:NCBI gene (formerly Entrezgene);Acc:791162]

Location

About this transcript

This transcript has 5 exons, is annotated with 14 domains and features, is associated with 282 variant alleles and maps to 71 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000084348.6	trappc12-201	3193	760aa	ENSDARP00000078783.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1RE04	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000163222.2	trappc12-203	2673	760aa	ENSDARP00000131230.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1RE04	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000156215.3	trappc12-202	2009	204aa	ENSDARP00000129671.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 2,009 bps, Translation length: 204 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000156215.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.