Transcript: ENSDART00000156028.2 si:ch211-207n2.7-203

Description

si:ch211-207n2.7 [Source:ZFIN;Acc:ZDB-GENE-131121-497]

Location

About this transcript

This transcript has 5 exons, is annotated with 14 domains and features, is associated with 462 variant alleles and maps to 91 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000155379.3	si:ch211-207n2.7-202	3324	308aa	ENSDARP00000128313.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X1WDL4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000186628.1	si:ch211-207n2.7-204	1668	292aa	ENSDARP00000153779.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000156028.2	si:ch211-207n2.7-203	569	148aa	ENSDARP00000129229.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000153764.2	si:ch211-207n2.7-201	539	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 5, Coding exons: 3, Transcript length: 569 bps, Translation length: 148 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000156028.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.