Transcript: ENSDART00000155905.2 NR4A1-202

Description

nuclear receptor subfamily 4, group A, member 1 [Source:ZFIN;Acc:ZDB-GENE-040704-11]

Location

Chromosome 23: 32,155,787-32,162,810 reverse strand.

About this transcript

This transcript has 2 exons, is annotated with 2 domains and features, is associated with 161 variant alleles and maps to 11 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000000796.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000000876.11	NR4A1-201	2945	574aa	ENSDARP00000001911.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6GMG3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000184206.1	NR4A1-204	5310	605aa	ENSDARP00000145340.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000166682.2	NR4A1-205	5188	605aa	ENSDARP00000130172.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000157479.2	NR4A1-203	1767	574aa	ENSDARP00000141471.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6GMG3	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000155905.2	NR4A1-202	784	166aa	ENSDARP00000128524.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 784 bps, Translation length: 166 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000155905.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000155905.2 NR4A1-202

Summary

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Transcript: ENSDART00000155905.2 NR4A1-202

Summary

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