Transcript: ENSDART00000155865.2 tmtops2a-201

Description

teleost multiple tissue opsin 2a [Source:ZFIN;Acc:ZDB-GENE-130129-3]

Gene Synonyms

opn3l, tmt1a

Location

About this transcript

This transcript has 4 exons, is annotated with 33 domains and features, is associated with 1643 variant alleles and maps to 172 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000155865.2	tmtops2a-201	2560	370aa	ENSDARP00000129008.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	R9R6C7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 2,560 bps, Translation length: 370 residues

Version

ENSDART00000155865.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.