Transcript: ENSDART00000155844.3 nr1d4b-202

Description

nuclear receptor subfamily 1, group D, member 4b [Source:ZFIN;Acc:ZDB-GENE-080403-6]

Gene Synonyms

Reverbgamma-B, gb:dq017623

Location

About this transcript

This transcript has 8 exons, is annotated with 41 domains and features, is associated with 493 variant alleles and maps to 139 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000155844.3	nr1d4b-202	2482	576aa	ENSDARP00000127780.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X1WC37	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000185541.1	nr1d4b-203	1719	572aa	ENSDARP00000146996.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8Q1K0	-
ENSDART00000082475.7	nr1d4b-201	1060	354aa	ENSDARP00000076910.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QRU1	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

Summary

Statistics

Exons: 8, Coding exons: 8, Transcript length: 2,482 bps, Translation length: 576 residues

Version

ENSDART00000155844.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported partial [Definitions]