Transcript: ENSDART00000155754.3 SMG9-201

Description

SMG9 nonsense mediated mRNA decay factor [Source:ZFIN;Acc:ZDB-GENE-030131-9385]

Location

About this transcript

This transcript has 13 exons, is annotated with 9 domains and features, is associated with 311 variant alleles and maps to 94 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000109459.4	SMG9-202	1518	505aa	ENSDARP00000103685.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F7F6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000155754.3	SMG9-201	2342	414aa	ENSDARP00000128140.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Summary

Statistics

Exons: 13, Coding exons: 11, Transcript length: 2,342 bps, Translation length: 414 residues

Version

ENSDART00000155754.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.