Transcript: ENSDART00000155692.3 CCSER2-201

Description

coiled-coil serine-rich protein 2a [Source:ZFIN;Acc:ZDB-GENE-131121-492]

Location

Chromosome 17: 26,480,507-26,537,928 reverse strand.

About this transcript

This transcript has 12 exons, is annotated with 23 domains and features, is associated with 1698 variant alleles and maps to 59 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000087749.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000122366.3	CCSER2-203	7378	967aa	ENSDARP00000109178.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F0A9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000155692.3	CCSER2-201	4417	802aa	ENSDARP00000127565.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X1WBH4	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000155616.2	CCSER2-202	918	306aa	ENSDARP00000128511.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

Summary

Statistics

Exons: 12, Coding exons: 11, Transcript length: 4,417 bps, Translation length: 802 residues

Version

ENSDART00000155692.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000155692.3 CCSER2-201

Summary

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Transcript: ENSDART00000155692.3 CCSER2-201

Summary

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