Transcript: ENSDART00000155579.2 SPTSSB-201

Description

serine palmitoyltransferase, small subunit B [Source:ZFIN;Acc:ZDB-GENE-060421-6887]

Location

About this transcript

This transcript has 2 exons, is annotated with 10 domains and features, is associated with 13 variant alleles and maps to 145 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000155579.2	SPTSSB-201	2948	80aa	ENSDARP00000127984.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1RLT2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000181382.1	SPTSSB-202	3107	80aa	ENSDARP00000154838.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1RLT2	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 2, Coding exons: 1, Transcript length: 2,948 bps, Translation length: 80 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q1RLT2

Version

ENSDART00000155579.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.