Transcript: ENSDART00000155478.2 sh3yl1-202

Description

SH3 and SYLF domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040128-16]

Gene Synonyms

sb:cb1095

Location

About this transcript

This transcript has 7 exons, is annotated with 11 domains and features, is associated with 732 variant alleles and maps to 176 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000154960.3	sh3yl1-201	1986	336aa	ENSDARP00000128928.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X1WFC4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000155478.2	sh3yl1-202	776	258aa	ENSDARP00000129818.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X1WHV4	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000156436.2	sh3yl1-203	511	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 776 bps, Translation length: 258 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENSDART00000155478.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.