Transcript: ENSDART00000155399.3 si:ch1073-214b20.2-202

Description

si:ch1073-214b20.2 [Source:ZFIN;Acc:ZDB-GENE-131121-231]

Location

Chromosome 22: 34,616,151-34,624,811 forward strand.

About this transcript

This transcript has 4 exons, is annotated with 12 domains and features, is associated with 151 variant alleles and maps to 181 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000060953.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000104705.5	si:ch1073-214b20.2-201	734	244aa	ENSDARP00000095476.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000189563.1	si:ch1073-214b20.2-203	2655	221aa	ENSDARP00000157655.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000155399.3	si:ch1073-214b20.2-202	933	241aa	ENSDARP00000129526.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 933 bps, Translation length: 241 residues

Version

ENSDART00000155399.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000155399.3 si:ch1073-214b20.2-202

Summary

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Transcript: ENSDART00000155399.3 si:ch1073-214b20.2-202

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