Transcript: ENSDART00000155323.3 zgc:136872-202

Description

zgc:136872 [Source:ZFIN;Acc:ZDB-GENE-060421-5204]

Location

About this transcript

This transcript has 22 exons, is annotated with 30 domains and features, is associated with 801 variant alleles and maps to 171 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000155323.3	zgc:136872-202	2545	693aa	ENSDARP00000128589.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QW40	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000122453.2	zgc:136872-201	2460	693aa	ENSDARP00000108278.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QW40	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 22, Coding exons: 21, Transcript length: 2,545 bps, Translation length: 693 residues

Version

ENSDART00000155323.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.