Transcript: ENSDART00000155312.2 smc1b-201

Description

structural maintenance of chromosomes 1B [Source:ZFIN;Acc:ZDB-GENE-091217-1]

Gene Synonyms

zmp:0000000547

Location

About this transcript

This transcript has 25 exons, is annotated with 26 domains and features, is associated with 591 variant alleles and maps to 167 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000155312.2	smc1b-201	4042	1234aa	ENSDARP00000128642.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X1WEJ1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000157389.2	smc1b-202	522	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 25, Coding exons: 25, Transcript length: 4,042 bps, Translation length: 1,234 residues

Version

ENSDART00000155312.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.