Transcript: ENSDART00000155189.2 pdlim2-202

Description

PDZ and LIM domain 2 (mystique) [Source:ZFIN;Acc:ZDB-GENE-070308-4]

Location

About this transcript

This transcript has 4 exons, is annotated with 10 domains and features, is associated with 320 variant alleles and maps to 43 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000125920.4	pdlim2-201	2727	364aa	ENSDARP00000109858.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M3AVD9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000155189.2	pdlim2-202	713	142aa	ENSDARP00000127944.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 713 bps, Translation length: 142 residues

Version

ENSDART00000155189.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.