Transcript: ENSDART00000155151.2 nub1-202

Description

negative regulator of ubiquitin-like proteins 1 [Source:ZFIN;Acc:ZDB-GENE-080212-11]

Gene Synonyms

zgc:171563

Location

About this transcript

This transcript has 13 exons, is annotated with 28 domains and features, is associated with 153 variant alleles and maps to 71 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000105526.5	nub1-201	1743	580aa	ENSDARP00000096299.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F3W3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000155151.2	nub1-202	1866	544aa	ENSDARP00000128904.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X1WFA0	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000156920.3	nub1-203	504	168aa	ENSDARP00000128770.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X1WEW8	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

Summary

Statistics

Exons: 13, Coding exons: 13, Transcript length: 1,866 bps, Translation length: 544 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000155151.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.