Transcript: ENSDART00000155073.3 ARHGAP5-201

Description

Rho GTPase activating protein 5 [Source:ZFIN;Acc:ZDB-GENE-081014-1]

Location

Chromosome 17: 31,739,418-31,795,723 forward strand.

About this transcript

This transcript has 5 exons, is annotated with 7 domains and features, is associated with 1329 variant alleles and maps to 43 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000061294.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000086696.6	ARHGAP5-203	7266	1502aa	ENSDARP00000081131.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R372	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000156180.3	ARHGAP5-202	5837	1502aa	ENSDARP00000127654.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R372	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000155073.3	ARHGAP5-201	821	274aa	ENSDARP00000127617.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 821 bps, Translation length: 274 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENSDART00000155073.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000155073.3 ARHGAP5-201

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENSDART00000155073.3 ARHGAP5-201

Summary

About Us

Get help

Our sister sites

Follow us