Transcript: ENSDART00000155066.3 atf5b-202

Description

activating transcription factor 5b [Source:ZFIN;Acc:ZDB-GENE-030131-2637]

Gene Synonyms

fc14a10, wu:fc14a10

Location

About this transcript

This transcript has 4 exons, is annotated with 15 domains and features, is associated with 146 variant alleles and maps to 173 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000112838.4	atf5b-201	6504	435aa	ENSDARP00000098375.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QGR6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000155066.3	atf5b-202	2861	435aa	ENSDARP00000127988.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QGR6	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000170950.2	atf5b-203	404	116aa	ENSDARP00000136339.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IPC0	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 4, Coding exons: 2, Transcript length: 2,861 bps, Translation length: 435 residues

Version

ENSDART00000155066.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.