Transcript: ENSDART00000154981.2 senp6b-201

Description

SUMO specific peptidase 6b [Source:ZFIN;Acc:ZDB-GENE-030131-6330]

Gene Synonyms

fi47d06, wu:fi47d06

Location

Chromosome 17: 36,849,722-36,860,988 reverse strand.

About this transcript

This transcript has 21 exons, is annotated with 11 domains and features, is associated with 663 variant alleles and maps to 178 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000079992.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000154981.2	senp6b-201	2800	683aa	ENSDARP00000128862.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X1WF58	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000182786.1	senp6b-202	3541	565aa	ENSDARP00000150780.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8RQR1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000193967.1	senp6b-203	3493	549aa	ENSDARP00000149897.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8Q9I1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 21, Coding exons: 21, Transcript length: 2,800 bps, Translation length: 683 residues

Version

ENSDART00000154981.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000154981.2 senp6b-201

Summary

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Transcript: ENSDART00000154981.2 senp6b-201

Summary

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