Transcript: ENSDART00000154967.4 lrp1aa-201

Description

low density lipoprotein receptor-related protein 1Aa [Source:ZFIN;Acc:ZDB-GENE-030131-7889]

Gene Synonyms

lrp1a, si:dkey-40c23.4, wu:fj39b01

Location

Chromosome 11: 1,628,538-1,754,630 forward strand.

About this transcript

This transcript has 27 exons, is annotated with 143 domains and features, is associated with 2704 variant alleles and maps to 145 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000097827.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000164394.2	lrp1aa-202	13518	4505aa	ENSDARP00000133829.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0H2UKL4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000154967.4	lrp1aa-201	4949	1540aa	ENSDARP00000129678.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X1WHG6	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000172863.2	lrp1aa-203	3571	1190aa	ENSDARP00000142573.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A140LH43	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000173023.2	lrp1aa-204	3053	979aa	ENSDARP00000142561.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A140LH31	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000173062.2	lrp1aa-205	1685	128aa	ENSDARP00000142391.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A140LGL2	-
ENSDART00000173330.2	lrp1aa-207	582	193aa	ENSDARP00000142425.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A140LGP6	-
ENSDART00000173143.2	lrp1aa-206	309	102aa	ENSDARP00000142123.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A140LFU7	-

Summary

Statistics

Exons: 27, Coding exons: 27, Transcript length: 4,949 bps, Translation length: 1,540 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000154967.4

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000154967.4 lrp1aa-201

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENSDART00000154967.4 lrp1aa-201

Summary

About Us

Get help

Our sister sites

Follow us