Transcript: ENSDART00000154925.3 arhgap33-203

Description

Rho GTPase activating protein 33 [Source:ZFIN;Acc:ZDB-GENE-121105-12]

Gene Synonyms

SNX26, wu:fc76f02

Location

Chromosome 16: 44,788,331-44,878,255 reverse strand.

About this transcript

This transcript has 23 exons, is annotated with 40 domains and features, is associated with 1032 variant alleles and maps to 234 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000011333.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000154925.3	arhgap33-203	3519	1173aa	ENSDARP00000127747.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X1WC05	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000185810.1	arhgap33-205	3336	70aa	ENSDARP00000150472.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8QEX5	-
ENSDART00000154697.3	arhgap33-202	1861	601aa	ENSDARP00000129381.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X1WGM3	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000154391.2	arhgap33-201	797	202aa	ENSDARP00000128751.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X1WEV0	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000157375.2	arhgap33-204	612	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 23, Coding exons: 23, Transcript length: 3,519 bps, Translation length: 1,173 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENSDART00000154925.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000154925.3 arhgap33-203

Summary

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Transcript: ENSDART00000154925.3 arhgap33-203

Summary

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