Transcript: ENSDART00000154921.2 larp1b-202

Description

La ribonucleoprotein 1B [Source:ZFIN;Acc:ZDB-GENE-030131-4154]

Location

About this transcript

This transcript has 9 exons, is annotated with 18 domains and features, is associated with 198 variant alleles and maps to 116 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000025096.10	larp1b-201	5067	1076aa	ENSDARP00000007794.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q931	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000154921.2	larp1b-202	1725	518aa	ENSDARP00000128243.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 1,725 bps, Translation length: 518 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000154921.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.